Here is a list of all class members with links to the classes they belong to:
- n -
- n
: __bam_mplp_t
, __faidx_t
, __hts_idx_t
, bcf_fmt_t
, bcf_hdr_t
, bins_t
- N
: cram_feature
- n
: hgacc_t
, hts_itr_t
, mempool_t
, regitr_t
, variant_t
- n11
: hgacc_t
- n1_
: hgacc_t
- n_1
: hgacc_t
- n_allele
: bcf1_t
- n_alleles()
: gamgee::Variant
- n_bins
: __hts_idx_t
- n_blks
: bgzf_mtaux_t
- n_chromosomes()
: gamgee::VariantHeader
- n_cigar
: bam1_core_t
- n_filters()
: gamgee::VariantHeader
- n_flt
: bcf_dec_t
- n_fmt
: bcf1_t
- n_individual_fields()
: gamgee::VariantHeader
- n_info
: bcf1_t
- n_lvls
: __hts_idx_t
- n_mapped
: __hts_idx_t
- n_no_coor
: __hts_idx_t
- n_off
: hts_itr_t
- n_plp
: __bam_mplp_t
- n_sample
: bcf1_t
- n_samples()
: gamgee::IndividualField< TYPE >
, gamgee::Variant
, gamgee::VariantHeader
- n_sequences()
: gamgee::SamHeader
- n_shared_fields()
: gamgee::VariantHeader
- n_smpl
: bcf_sr_t
, bcf_srs_t
- n_targets
: bam_hdr_t
- n_threads
: bgzf_mtaux_t
- n_unmapped
: __hts_idx_t
- n_var
: bcf_dec_t
- nalloc
: cram_index
- nals
: _bcf_sr_regions_t
- name
: __faidx_t
, cram_record
, gamgee::Fastq
, gamgee::Sam
, gamgee::SamTag< TAG_TYPE >
, ref_entry
, SAM_PG
, SAM_RG
, SAM_SQ
- name_blk
: cram_slice
- name_len
: cram_record
, SAM_PG
, SAM_RG
- nbits
: cram_beta_decoder
- nbuffer
: bcf_sr_t
- ncigar
: cram_record
, cram_slice
- ncodes
: cram_huffman_decoder
- netfp
: hFILE_net
- next
: __linkbuf_t
, cram_map
, hts_opt
, SAM_hdr_item_s
, SAM_hdr_tag_s
, spare_bams
, t_pool_job
, t_res
- next_serial
: t_results_queue
- next_trial
: cram_metrics
- nfeature
: cram_record
- nfeatures
: cram_slice
- nfilter_ids
: bcf_sr_t
- nhrec
: bcf_hdr_t
- nidx
: _bcf_sweep_t
, reglist_t
- njobs
: t_pool
- nkeys
: bcf_hrec_t
- no_reconnect
: knetFile_s
- no_ref
: cram_fd
- noffs
: __bgzidx_t
- non_ref_het()
: gamgee::Genotype
- npg
: SAM_hdr
- npg_end
: SAM_hdr
- npg_end_alloc
: SAM_hdr
- npools
: pool_alloc_t
- nreaders
: bcf_srs_t
- nrec
: _bcf_sweep_t
- nref
: refs_t
, SAM_hdr
- nregs
: _region_t
, reglist_t
- nrg
: SAM_hdr
- nsamp
: cram_stats
- nsamples_ori
: bcf_hdr_t
- nseq
: _regidx_t
, cram_index
- nseqs
: _bcf_sr_regions_t
- nslice
: cram_index
- nstrings
: string_alloc_t
- ntags
: cram_record
- nTL
: cram_block_compression_hdr
- nTN
: cram_slice
- ntransl
: bcf_hdr_t
- num_alt_alleles()
: gamgee::VariantBuilderSharedRegion
- num_bases
: cram_container
- num_blocks
: cram_block_slice_hdr
, cram_container
- num_bytes()
: gamgee::SamBuilderDataField
- num_content_ids
: cram_block_slice_hdr
- num_elements()
: gamgee::SamBuilderDataField
- num_landmarks
: cram_block_compression_hdr
, cram_container
- num_present_fields()
: gamgee::VariantBuilderIndividualRegion
- num_present_info_fields()
: gamgee::VariantBuilderSharedRegion
- num_records
: cram_block_compression_hdr
, cram_block_slice_hdr
, cram_container
- num_samples()
: gamgee::VariantBuilderMultiSampleVector< ELEMENT_TYPE >
- num_values()
: gamgee::utils::ShortValueOptimizedStorage< ELEMENT_TYPE >
- nvals
: cram_huffman_encoder
, cram_stats
- nwaiting
: t_pool