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Gamgee
You miserable little maggot. I'll stove your head in!
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Gamgee
You miserable little maggot. I'll stove your head in!
|
#include <cram_structs.h>
Public Member Functions | |
| khash_t (s_i2i)*tags_used | |
Public Attributes | |
| int32_t | length |
| int32_t | ref_seq_id |
| int32_t | ref_seq_start |
| int32_t | ref_seq_span |
| int32_t | record_counter |
| int64_t | num_bases |
| int32_t | num_records |
| int32_t | num_blocks |
| int32_t | num_landmarks |
| int32_t * | landmark |
| size_t | offset |
| cram_block_compression_hdr * | comp_hdr |
| cram_block * | comp_hdr_block |
| int | max_slice |
| int | curr_slice |
| int | max_rec |
| int | curr_rec |
| int | max_c_rec |
| int | curr_c_rec |
| int | slice_rec |
| int | curr_ref |
| int | last_pos |
| struct cram_slice ** | slices |
| struct cram_slice * | slice |
| int | pos_sorted |
| int | max_apos |
| int | last_slice |
| int | multi_seq |
| int | unsorted |
| int | ref_start |
| int | first_base |
| int | last_base |
| int | ref_id |
| int | ref_end |
| char * | ref |
| bam_seq_t ** | bams |
| cram_stats * | stats [DS_END] |
| int * | refs_used |
| uint32_t | crc32 |
| cram_container::khash_t | ( | s_i2i | ) |
| bam_seq_t** cram_container::bams |
| cram_block_compression_hdr* cram_container::comp_hdr |
| cram_block* cram_container::comp_hdr_block |
| uint32_t cram_container::crc32 |
| int cram_container::curr_c_rec |
| int cram_container::curr_rec |
| int cram_container::curr_ref |
| int cram_container::curr_slice |
| int cram_container::first_base |
| int32_t* cram_container::landmark |
| int cram_container::last_base |
| int cram_container::last_pos |
| int cram_container::last_slice |
| int32_t cram_container::length |
| int cram_container::max_apos |
| int cram_container::max_c_rec |
| int cram_container::max_rec |
| int cram_container::max_slice |
| int cram_container::multi_seq |
| int64_t cram_container::num_bases |
| int32_t cram_container::num_blocks |
| int32_t cram_container::num_landmarks |
| int32_t cram_container::num_records |
| size_t cram_container::offset |
| int cram_container::pos_sorted |
| int32_t cram_container::record_counter |
| char* cram_container::ref |
| int cram_container::ref_end |
| int cram_container::ref_id |
| int32_t cram_container::ref_seq_id |
| int32_t cram_container::ref_seq_span |
| int32_t cram_container::ref_seq_start |
| int cram_container::ref_start |
| int* cram_container::refs_used |
| struct cram_slice * cram_container::slice |
| int cram_container::slice_rec |
| struct cram_slice** cram_container::slices |
| cram_stats* cram_container::stats[DS_END] |
| int cram_container::unsorted |
1.8.8