Here is a list of all class members with links to the classes they belong to:

- a -

• a : hts_itr_t , MD5_CTX
• add_chromosome() : gamgee::VariantHeaderBuilder
• add_filter() : gamgee::VariantHeaderBuilder
• add_header() : gamgee::SamWriter , gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering > , gamgee::VariantWriter
• add_headers() : gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >
• add_individual_field() : gamgee::VariantHeaderBuilder
• add_input_merged_idx_pair() : gamgee::utils::MergedVCFLUTBase< inputs_2_merged_LUT_is_input_ordered, merged_2_inputs_LUT_is_input_ordered >
• add_record() : gamgee::SamWriter , gamgee::VariantWriter
• add_sample() : gamgee::VariantHeaderBuilder
• add_shared_field() : gamgee::VariantHeaderBuilder
• add_source() : gamgee::VariantHeaderBuilder
• advanced_add_arbitrary_line() : gamgee::VariantHeaderBuilder
• aend : cram_record
• afeatures : cram_slice
• alignment_start() : gamgee::Sam , gamgee::Variant
• alignment_stop() : gamgee::Sam , gamgee::Variant
• all_intervals : gamgee::IndexedVariantIterator
• allele : bcf_dec_t
• allele_key() : gamgee::Genotype
• allele_keys() : gamgee::Genotype
• allele_mask() : gamgee::Variant
• allele_string() : gamgee::Genotype
• allele_strings() : gamgee::Genotype
• alloc : cram_block
• alloced : mFILE
• als : _bcf_sr_regions_t , bcf_dec_t
• als_str : _bcf_sr_regions_t
• als_type : _bcf_sr_regions_t
• alt() : gamgee::Variant
• AP_delta : cram_block_compression_hdr
• apos : cram_record
• apply_filters : bcf_srs_t
• arg : t_pool_job
• at_eof : hFILE
• aTN : cram_slice
• aux : bam_pileup1_t , cram_record
• aux_BD_blk : cram_slice
• aux_BI_blk : cram_slice
• aux_blk : cram_slice
• aux_BQ_blk : cram_slice
• aux_FZ_blk : cram_slice
• aux_oq_blk : cram_slice
• aux_OQ_blk : cram_slice
• aux_os_blk : cram_slice
• aux_oz_blk : cram_slice
• aux_size : cram_record