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Public Attributes | List of all members
_bcf_sr_regions_t Struct Reference

#include <synced_bcf_reader.h>

Public Attributes

tbx_ttbx
 
hts_itr_titr
 
kstring_t line
 
htsFilefile
 
char * fname
 
int is_bin
 
char ** als
 
kstring_t als_str
 
int nals
 
int mals
 
int als_type
 
void(* missed_reg_handler )(struct _bcf_sr_regions_t *, void *)
 
void * missed_reg_data
 
struct _region_tregs
 
void * seq_hash
 
char ** seq_names
 
int nseqs
 
int iseq
 
int start
 
int end
 
int prev_seq
 
int prev_start
 

Member Data Documentation

char** _bcf_sr_regions_t::als
kstring_t _bcf_sr_regions_t::als_str
int _bcf_sr_regions_t::als_type
int _bcf_sr_regions_t::end
htsFile* _bcf_sr_regions_t::file
char* _bcf_sr_regions_t::fname
int _bcf_sr_regions_t::is_bin
int _bcf_sr_regions_t::iseq
hts_itr_t* _bcf_sr_regions_t::itr
kstring_t _bcf_sr_regions_t::line
int _bcf_sr_regions_t::mals
void* _bcf_sr_regions_t::missed_reg_data
void(* _bcf_sr_regions_t::missed_reg_handler)(struct _bcf_sr_regions_t *, void *)
int _bcf_sr_regions_t::nals
int _bcf_sr_regions_t::nseqs
int _bcf_sr_regions_t::prev_seq
int _bcf_sr_regions_t::prev_start
struct _region_t* _bcf_sr_regions_t::regs
void* _bcf_sr_regions_t::seq_hash
char** _bcf_sr_regions_t::seq_names
int _bcf_sr_regions_t::start
tbx_t* _bcf_sr_regions_t::tbx

The documentation for this struct was generated from the following file: