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Public Attributes | List of all members
htsFile Struct Reference

#include <hts.h>

Public Attributes

uint32_t is_bin:1
 
uint32_t is_write:1
 
uint32_t is_be:1
 
uint32_t is_cram:1
 
uint32_t dummy:28
 
int64_t lineno
 
kstring_t line
 
char * fn
 
char * fn_aux
 
union {
   BGZF *   bgzf
 
   struct cram_fd *   cram
 
   struct hFILE *   hfile
 
   void *   voidp
 
fp
 
htsFormat format
 

Member Data Documentation

BGZF* htsFile::bgzf
struct cram_fd* htsFile::cram
uint32_t htsFile::dummy
char* htsFile::fn
char * htsFile::fn_aux
htsFormat htsFile::format
union { ... } htsFile::fp
struct hFILE* htsFile::hfile
uint32_t htsFile::is_be
uint32_t htsFile::is_bin
uint32_t htsFile::is_cram
uint32_t htsFile::is_write
kstring_t htsFile::line
int64_t htsFile::lineno
void* htsFile::voidp

The documentation for this struct was generated from the following file: