Here is a list of all class members with links to the classes they belong to:

- i -

• i : bcf_info_t , cram_feature
• I : cram_feature
• i : hts_itr_t , hts_opt , pmap_t , regitr_t , worker_t
• id : bam1_t , bcf_dec_t , bcf_fmt_t , bcf_hdr_t , bcf_idinfo_t , cram_slice , gamgee::ReadGroup , gamgee::Variant , SAM_PG , SAM_RG
• idx : _bcf_sweep_t , BGZF , cram_block , reglist_t , t_pool_worker_t , tbx_t
• idx_build_otf : BGZF
• idx_done : _bcf_sweep_t
• ignore_md5 : cram_fd
• ignore_sam_err : bam_hdr_t
• iidx : _bcf_sweep_t
• indel : bam_pileup1_t , gamgee::Genotype
• index : cram_fd
• index_sz : cram_fd
• IndexedSamIterator() : gamgee::IndexedSamIterator
• IndexedSamReader() : gamgee::IndexedSamReader< ITERATOR >
• IndexedVariantIterator() : gamgee::IndexedVariantIterator
• IndexedVariantReader() : gamgee::IndexedVariantReader< ITERATOR >
• IndexLoadException() : gamgee::IndexLoadException
• indiv : bcf1_t
• indiv_dirty : bcf_dec_t
• individual_field_as_float() : gamgee::Variant
• individual_field_as_integer() : gamgee::Variant
• individual_field_as_string() : gamgee::Variant
• individual_field_type() : gamgee::VariantHeader
• individual_fields() : gamgee::VariantHeader
• IndividualField() : gamgee::IndividualField< TYPE >
• IndividualFieldIterator() : gamgee::IndividualFieldIterator< TYPE >
• IndividualFieldValue() : gamgee::IndividualFieldValue< VALUE_TYPE >
• IndividualFieldValueIterator() : gamgee::IndividualFieldValueIterator< VALUE_TYPE >
• info : bcf_dec_t , bcf_idinfo_t
• init_reader() : gamgee::MultipleVariantReader< ITERATOR >
• insert_size() : gamgee::Sam
• insertion() : gamgee::Genotype
• integer_individual_field() : gamgee::Variant
• integer_shared_field() : gamgee::Variant
• integer_tag() : gamgee::Sam
• Interval() : gamgee::Interval
• IntervalType : gamgee::Interval
• is_be : BGZF , htsFile
• is_bin : _bcf_sr_regions_t , htsFile
• is_compressed : BGZF
• is_cram : htsFile
• is_del : bam_pileup1_t
• is_fastq() : gamgee::Fastq
• is_gt : fmt_aux_t
• is_gzip : BGZF
• is_head : bam_pileup1_t
• is_ready : knetFile_s
• is_refskip : bam_pileup1_t
• is_set() : gamgee::utils::ShortValueOptimizedStorage< ELEMENT_TYPE > , gamgee::VariantBuilderCoreField< FIELD_TYPE >
• is_socket : hFILE_fd
• is_tail : bam_pileup1_t
• is_write : BGZF , htsFile
• iseq : _bcf_sr_regions_t
• isize : bam1_core_t
• iter : __bam_mplp_t
• itr : _bcf_sr_regions_t , bcf_sr_t