bam1_core_t Struct Reference

#include <sam.h>

Public Attributes
int32_t	tid
int32_t	pos
uint32_t	bin:16
uint32_t	qual:8
uint32_t	l_qname:8
uint32_t	flag:16
uint32_t	n_cigar:16
int32_t	l_qseq
int32_t	mtid
int32_t	mpos
int32_t	isize

Member Data Documentation

uint32_t bam1_core_t::bin

uint32_t bam1_core_t::flag

int32_t bam1_core_t::isize

uint32_t bam1_core_t::l_qname

int32_t bam1_core_t::l_qseq

int32_t bam1_core_t::mpos

int32_t bam1_core_t::mtid

uint32_t bam1_core_t::n_cigar

int32_t bam1_core_t::pos

uint32_t bam1_core_t::qual

int32_t bam1_core_t::tid

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The documentation for this struct was generated from the following file:

• build/contrib/htslib/src/htslib/htslib/sam.h