- a -

• add_chromosome() : gamgee::VariantHeaderBuilder
• add_filter() : gamgee::VariantHeaderBuilder
• add_header() : gamgee::SamWriter , gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering > , gamgee::VariantWriter
• add_headers() : gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >
• add_individual_field() : gamgee::VariantHeaderBuilder
• add_input_merged_idx_pair() : gamgee::utils::MergedVCFLUTBase< inputs_2_merged_LUT_is_input_ordered, merged_2_inputs_LUT_is_input_ordered >
• add_record() : gamgee::SamWriter , gamgee::VariantWriter
• add_sample() : gamgee::VariantHeaderBuilder
• add_shared_field() : gamgee::VariantHeaderBuilder
• add_source() : gamgee::VariantHeaderBuilder
• advanced_add_arbitrary_line() : gamgee::VariantHeaderBuilder
• alignment_start() : gamgee::Sam , gamgee::Variant
• alignment_stop() : gamgee::Sam , gamgee::Variant
• allele_key() : gamgee::Genotype
• allele_keys() : gamgee::Genotype
• allele_mask() : gamgee::Variant
• allele_string() : gamgee::Genotype
• allele_strings() : gamgee::Genotype
• alt() : gamgee::Variant