- c -

• capacity() : gamgee::utils::ShortValueOptimizedStorage< ELEMENT_TYPE >
• char_tag() : gamgee::Sam
• chop() : gamgee::Fastq
• chr() : gamgee::Interval
• chromosome() : gamgee::Sam , gamgee::Variant
• chromosome_name() : gamgee::Variant
• ChromosomeNotFoundException() : gamgee::ChromosomeNotFoundException
• chromosomes() : gamgee::VariantHeader
• ChromosomeSizeException() : gamgee::ChromosomeSizeException
• Cigar() : gamgee::Cigar
• cigar() : gamgee::Sam
• cigar_op() : gamgee::Cigar
• cigar_oplen() : gamgee::Cigar
• clear() : gamgee::utils::MergedVCFLUTBase< inputs_2_merged_LUT_is_input_ordered, merged_2_inputs_LUT_is_input_ordered > , gamgee::utils::ShortValueOptimizedStorage< ELEMENT_TYPE > , gamgee::VariantBuilder , gamgee::VariantBuilderCoreField< FIELD_TYPE > , gamgee::VariantBuilderIndividualField< ENCODED_TYPE, BULK_CHANGE_TYPE > , gamgee::VariantBuilderIndividualRegion , gamgee::VariantBuilderSharedRegion , gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >
• combined_header() : gamgee::MultipleVariantReader< ITERATOR >
• comment() : gamgee::Fastq
• complex() : gamgee::Genotype
• consumes_read_bases() : gamgee::Cigar
• consumes_reference_bases() : gamgee::Cigar
• copy_into() : gamgee::SamBuilderDataField
• current_interval() : gamgee::IndexedSamIterator