- r -

• raw_data_ptr() : gamgee::SamBuilderDataField
• read_and_cache_current_pointee() : gamgee::IndividualFieldValueIterator< VALUE_TYPE > , gamgee::SharedFieldIterator< VALUE_TYPE >
• read_groups() : gamgee::SamHeader
• ReadBases() : gamgee::ReadBases
• ReadGroup() : gamgee::ReadGroup
• ref() : gamgee::Variant
• ref_allele_length() : gamgee::VariantBuilderSharedRegion
• ref_base() : gamgee::ReferenceIterator
• ReferenceBlockSplittingVariantIterator() : gamgee::ReferenceBlockSplittingVariantIterator
• ReferenceIterator() : gamgee::ReferenceIterator
• ReferenceMap() : gamgee::ReferenceMap
• remove() : gamgee::VariantBuilderIndividualField< ENCODED_TYPE, BULK_CHANGE_TYPE >
• remove_alignment_stop() : gamgee::VariantBuilder
• remove_alt_alleles() : gamgee::VariantBuilder , gamgee::VariantBuilderSharedRegion
• remove_filters() : gamgee::VariantBuilder , gamgee::VariantBuilderSharedRegion
• remove_id() : gamgee::VariantBuilder , gamgee::VariantBuilderSharedRegion
• remove_individual_field() : gamgee::VariantBuilder , gamgee::VariantBuilderIndividualRegion
• remove_individual_fields() : gamgee::VariantBuilder
• remove_info_field() : gamgee::VariantBuilderSharedRegion
• remove_qual() : gamgee::VariantBuilder
• remove_shared_field() : gamgee::VariantBuilder
• remove_shared_fields() : gamgee::VariantBuilder
• removed() : gamgee::VariantBuilderIndividualField< ENCODED_TYPE, BULK_CHANGE_TYPE >
• reset() : gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >
• reset_input_idx_for_merged() : gamgee::utils::MergedVCFLUTBase< inputs_2_merged_LUT_is_input_ordered, merged_2_inputs_LUT_is_input_ordered >
• reset_luts() : gamgee::utils::MergedVCFLUTBase< inputs_2_merged_LUT_is_input_ordered, merged_2_inputs_LUT_is_input_ordered >
• reset_merged_idx_for_input() : gamgee::utils::MergedVCFLUTBase< inputs_2_merged_LUT_is_input_ordered, merged_2_inputs_LUT_is_input_ordered >
• resize_inputs_2_merged_lut_if_needed() : gamgee::utils::MergedVCFLUTBase< inputs_2_merged_LUT_is_input_ordered, merged_2_inputs_LUT_is_input_ordered >
• resize_luts_if_needed() : gamgee::utils::MergedVCFAllelesIdxLUT< inputs_2_merged_LUT_is_input_ordered, merged_2_inputs_LUT_is_input_ordered > , gamgee::utils::MergedVCFLUTBase< inputs_2_merged_LUT_is_input_ordered, merged_2_inputs_LUT_is_input_ordered >
• resize_merged_2_inputs_lut_if_needed() : gamgee::utils::MergedVCFLUTBase< inputs_2_merged_LUT_is_input_ordered, merged_2_inputs_LUT_is_input_ordered >
• reverse() : gamgee::Sam
• reverse_complement() : gamgee::Fastq