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Gamgee
You miserable little maggot. I'll stove your head in!
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Gamgee
You miserable little maggot. I'll stove your head in!
|
#include <cram_structs.h>
Public Member Functions | |
| khash_t (m_s2i)*pair[2] | |
Public Attributes | |
| cram_block_slice_hdr * | hdr |
| cram_block * | hdr_block |
| cram_block ** | block |
| cram_block ** | block_by_id |
| int | last_apos |
| int | max_apos |
| uint64_t | id |
| cram_record * | crecs |
| uint32_t * | cigar |
| uint32_t | cigar_alloc |
| uint32_t | ncigar |
| cram_feature * | features |
| int | nfeatures |
| int | afeatures |
| uint32_t * | TN |
| int | nTN |
| int | aTN |
| cram_block * | name_blk |
| cram_block * | seqs_blk |
| cram_block * | qual_blk |
| cram_block * | base_blk |
| cram_block * | soft_blk |
| cram_block * | aux_blk |
| cram_block * | aux_OQ_blk |
| cram_block * | aux_BQ_blk |
| cram_block * | aux_BD_blk |
| cram_block * | aux_BI_blk |
| cram_block * | aux_FZ_blk |
| cram_block * | aux_oq_blk |
| cram_block * | aux_os_blk |
| cram_block * | aux_oz_blk |
| string_alloc_t * | pair_keys |
| char * | ref |
| int | ref_start |
| int | ref_end |
| int | ref_id |
| cram_slice::khash_t | ( | m_s2i | ) |
| int cram_slice::afeatures |
| int cram_slice::aTN |
| cram_block* cram_slice::aux_BD_blk |
| cram_block* cram_slice::aux_BI_blk |
| cram_block* cram_slice::aux_blk |
| cram_block* cram_slice::aux_BQ_blk |
| cram_block* cram_slice::aux_FZ_blk |
| cram_block* cram_slice::aux_OQ_blk |
| cram_block* cram_slice::aux_oq_blk |
| cram_block* cram_slice::aux_os_blk |
| cram_block* cram_slice::aux_oz_blk |
| cram_block* cram_slice::base_blk |
| cram_block** cram_slice::block |
| cram_block** cram_slice::block_by_id |
| uint32_t* cram_slice::cigar |
| uint32_t cram_slice::cigar_alloc |
| cram_record* cram_slice::crecs |
| cram_feature* cram_slice::features |
| cram_block_slice_hdr* cram_slice::hdr |
| cram_block* cram_slice::hdr_block |
| uint64_t cram_slice::id |
| int cram_slice::last_apos |
| int cram_slice::max_apos |
| cram_block* cram_slice::name_blk |
| uint32_t cram_slice::ncigar |
| int cram_slice::nfeatures |
| int cram_slice::nTN |
| string_alloc_t* cram_slice::pair_keys |
| cram_block* cram_slice::qual_blk |
| char* cram_slice::ref |
| int cram_slice::ref_end |
| int cram_slice::ref_id |
| int cram_slice::ref_start |
| cram_block* cram_slice::seqs_blk |
| cram_block* cram_slice::soft_blk |
| uint32_t* cram_slice::TN |
1.8.8