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Atera Kidney non-diseased FFPE

Explore 399,120 cells in an Atera v1 WTA human kidney section, colored by the dataset's 28 default Leiden clusters. The tissue view streams images, cell boundaries, and gene expression from the published DegaFiles.

Open the Landscape–Clustergram tutorial to compare default cluster signatures and explore cell-type composition by distance from podocyte-defined glomerular footprints. The tutorial uses plain AnnData for dotplot Clustergrams and a distance-band Composition linked to a Landscape, with alpha shapes and gradient bands stored as GeoDataFrames.

DegaFiles on GitHub · Annotated counts on Hugging Face