Skip to main content

MergeBatchSites

Combines filtered variants across batches. The WDL can be found at: /wdl/MergeBatchSites.wdl.

Prerequisites​

  • Filter Batch

Inputs​

  • List of filtered PESR VCFs (FilterBatch)
  • List of filtered depth VCFs (FilterBatch)

Outputs​

  • Combined cohort PESR and depth VCFs