| Class | Description |
|---|---|
| Gene |
Holds annotation of a gene for storage in an OverlapDetector.
|
| GeneAnnotationReader |
Load gene annotations into an OverlapDetector of Gene objects.
|
| RefFlatReader |
Loads gene annotations from a refFlat file into an OverlapDetector
|
| Enum | Description |
|---|---|
| LocusFunction |
Describes the behavior of a locus relative to a gene.
|
| RefFlatReader.RefFlatColumns |
| Exception | Description |
|---|---|
| AnnotationException |
Exception thrown when loading gene annotations.
|