| Class | Description |
|---|---|
| CollectIndependentReplicateMetrics |
A CLP that, given a BAM and a VCF with genotypes of the same sample, estimates the rate of independent replication of reads within the bam.
|
| IndependentReplicateMetric |
A class to store information relevant for biological rate estimation
|
| MergeableMetricBase |
An extension of MetricBase that knows how to merge-by-adding fields that are appropriately annotated.
|
| Annotation Type | Description |
|---|---|
| MergeableMetricBase.MergeByAdding | |
| MergeableMetricBase.MergeByAssertEquals | |
| MergeableMetricBase.NoMergingIsDerived |