Hierarchy For Package picard.fingerprint

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • java.util.AbstractMap<K,V> (implements java.util.Map<K,V>)
    • java.util.TreeMap<K,V> (implements java.lang.Cloneable, java.util.NavigableMap<K,V>, java.io.Serializable)
      • picard.fingerprint.Fingerprint
  • picard.cmdline.CommandLineProgram
    • picard.fingerprint.CheckFingerprint
    • picard.fingerprint.CrosscheckReadGroupFingerprints
  • picard.fingerprint.FingerprintChecker
  • picard.fingerprint.FingerprintResults
  • picard.fingerprint.GenotypeReader
  • picard.fingerprint.GenotypeReader.VariantIterator (implements htsjdk.samtools.util.CloseableIterator<T>)
  • picard.fingerprint.HaplotypeBlock (implements java.lang.Comparable<T>)
  • picard.fingerprint.HaplotypeMap
  • picard.fingerprint.HaplotypeProbabilities
    • picard.fingerprint.HaplotypeProbabilitiesFromGenotype
    • picard.fingerprint.HaplotypeProbabilitiesFromGenotypeLikelihoods
    • picard.fingerprint.HaplotypeProbabilitiesFromSequence
      • picard.fingerprint.HaplotypeProbabilitiesFromContaminatorSequence
    • picard.fingerprint.HaplotypeProbabilityOfNormalGivenTumor
  • picard.fingerprint.MatchResults (implements java.lang.Comparable<T>)
  • picard.fingerprint.Snp (implements java.lang.Comparable<T>)

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • picard.fingerprint.DiploidGenotype
    • picard.fingerprint.HaplotypeProbabilities.Genotype
    • picard.fingerprint.DiploidHaplotype