picard.fingerprint

Class FingerprintResults

java.lang.Object

picard.fingerprint.FingerprintResults

public class FingerprintResults
extends java.lang.Object

Class that is used to represent the results of comparing a read group within a SAM file against one or more set of fingerprint genotypes.

Author:

Tim Fennell

Constructor Summary

Constructors

Constructor and Description
FingerprintResults(java.io.File samFile, java.lang.String readGroup)

Method Summary

Modifier and Type	Method and Description
void	addResults(MatchResults matchResults)
java.util.SortedSet<MatchResults>	getMatchResults()
java.lang.String	getReadGroup()
java.io.File	getSamFile()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

FingerprintResults

public FingerprintResults(java.io.File samFile,
                          java.lang.String readGroup)

Method Detail

addResults

public void addResults(MatchResults matchResults)

getSamFile

public java.io.File getSamFile()

getReadGroup

public java.lang.String getReadGroup()

getMatchResults

public java.util.SortedSet<MatchResults> getMatchResults()