- c -

• COLLAPSE_ANY : synced_bcf_reader.h
• COLLAPSE_BOTH : synced_bcf_reader.h
• COLLAPSE_INDELS : synced_bcf_reader.h
• COLLAPSE_NONE : synced_bcf_reader.h
• COLLAPSE_SNPS : synced_bcf_reader.h
• COLLAPSE_SOME : synced_bcf_reader.h
• COMPILER_ID : CMakeCXXCompilerId.cpp , CMakeCCompilerId.c
• cram_aux : cram_structs.h
• cram_cigar : cram_structs.h
• CRAM_CIGAR : cram_structs.h
• CRAM_FDUP : cram_structs.h
• CRAM_FLAG_DETACHED : cram_structs.h
• CRAM_FLAG_MATE_DOWNSTREAM : cram_structs.h
• CRAM_FLAG_PRESERVE_QUAL_SCORES : cram_structs.h
• CRAM_FPAIRED : cram_structs.h
• CRAM_FPROPER_PAIR : cram_structs.h
• CRAM_FQCFAIL : cram_structs.h
• CRAM_FREAD1 : cram_structs.h
• CRAM_FREAD2 : cram_structs.h
• CRAM_FREVERSE : cram_structs.h
• CRAM_FSECONDARY : cram_structs.h
• CRAM_FUNMAP : cram_structs.h
• CRAM_KEY : cram_io.h
• CRAM_M_REVERSE : cram_structs.h
• CRAM_M_UNMAP : cram_structs.h
• CRAM_MAJOR_VERS : cram_structs.h
• CRAM_MAP : cram_structs.h
• CRAM_MAP_HASH : cram_structs.h
• CRAM_MINOR_VERS : cram_structs.h
• cram_mstrand : cram_structs.h
• cram_name_len : cram_structs.h
• cram_qname : cram_structs.h
• cram_qual : cram_structs.h
• cram_seq : cram_structs.h
• CRAM_SEQ : cram_structs.h
• cram_seqi : cram_structs.h
• cram_strand : cram_structs.h
• CRAM_SUBST_MATRIX : cram_structs.h