Uses of Class
picard.util.VariantType

Packages that use VariantType

Package	Description
picard.util

Uses of VariantType in picard.util

Methods in picard.util that return VariantType

Modifier and Type	Method and Description
static VariantType	VariantType.getVariantTypeFromOrdinal(int ordinal) Gets the enum for a given ordinal
static VariantType	VariantType.valueOf(java.lang.String name) Returns the enum constant of this type with the specified name.
static VariantType[]	VariantType.values() Returns an array containing the constants of this enum type, in the order they are declared.

Constructor parameters in picard.util with type arguments of type VariantType

Constructor and Description
DbSnpBitSetUtil(java.io.File dbSnpFile, htsjdk.samtools.SAMSequenceDictionary sequenceDictionary, java.util.Collection<VariantType> variantsToMatch) Constructor that creates a bit set with bits set to true for the given variant types.
DbSnpBitSetUtil(java.io.File dbSnpFile, htsjdk.samtools.SAMSequenceDictionary sequenceDictionary, java.util.Collection<VariantType> variantsToMatch, htsjdk.samtools.util.IntervalList intervals) Constructor.