picard.sam.markduplicates

Enum MarkDuplicates.DuplicateType

java.lang.Object

java.lang.Enum<MarkDuplicates.DuplicateType>

picard.sam.markduplicates.MarkDuplicates.DuplicateType

All Implemented Interfaces:

java.io.Serializable, java.lang.Comparable<MarkDuplicates.DuplicateType>

Enclosing class:

MarkDuplicates

public static enum MarkDuplicates.DuplicateType
extends java.lang.Enum<MarkDuplicates.DuplicateType>

Enum for the possible values that a duplicate read can be tagged with in the DT attribute.

Enum Constant Summary

Enum Constants

Enum Constant and Description
LIBRARY
SEQUENCING

Method Summary

Modifier and Type	Method and Description
java.lang.String	code()
static MarkDuplicates.DuplicateType	valueOf(java.lang.String name) Returns the enum constant of this type with the specified name.
static MarkDuplicates.DuplicateType[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

LIBRARY

public static final MarkDuplicates.DuplicateType LIBRARY

SEQUENCING

public static final MarkDuplicates.DuplicateType SEQUENCING

Method Detail

values

public static MarkDuplicates.DuplicateType[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (MarkDuplicates.DuplicateType c : MarkDuplicates.DuplicateType.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static MarkDuplicates.DuplicateType valueOf(java.lang.String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

java.lang.IllegalArgumentException - if this enum type has no constant with the specified name

java.lang.NullPointerException - if the argument is null

code

public java.lang.String code()