gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering > Member List

This is the complete list of members for gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >, including all inherited members.

add_header(const std::shared_ptr< bcf_hdr_t > &hdr)	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >
add_header(const VariantHeader &hdr)	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >
add_headers(const std::vector< std::shared_ptr< bcf_hdr_t >> &headers)	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >
add_headers(const std::vector< VariantHeader > &headers)	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >
clear()	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >	inline
get_enum_for_merged_field_idx(int merged_field_idx) const	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >	inline
get_input_header_idx_for_merged(unsigned inputGVCFIdx, int mergedIdx) const	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >	inline
get_input_sample_idx_for_merged(unsigned inputGVCFIdx, int mergedSampleIdx) const	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >	inline
get_merged_field_idx_for_enum(unsigned field_enum_idx) const	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >	inline
get_merged_header() const	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >	inline
get_merged_header_idx_for_input(unsigned inputGVCFIdx, int inputIdx) const	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >	inline
get_merged_sample_idx_for_input(unsigned inputGVCFIdx, int inputSampleIdx) const	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >	inline
get_raw_merged_header() const	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >	inline
operator=(const VariantHeaderMerger &)=delete	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >
operator=(VariantHeaderMerger &&)=default	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >
reset()	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >	inline
store_merged_field_idx_for_enum(const std::string &field, unsigned field_enum_idx)	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >
VariantHeaderMerger()	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >	inline
VariantHeaderMerger(const std::shared_ptr< bcf_hdr_t > &input_vcf_header)	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >	inline
VariantHeaderMerger(const VariantHeader &input_vcf_header)	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >	inline
VariantHeaderMerger(const std::vector< std::shared_ptr< bcf_hdr_t >> &input_vcf_headers)	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >	inline
VariantHeaderMerger(const std::vector< VariantHeader > &input_vcf_headers)	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >	inline
VariantHeaderMerger(const VariantHeaderMerger &)=delete	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >
VariantHeaderMerger(VariantHeaderMerger &&)=default	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >
~VariantHeaderMerger()=default	gamgee::VariantHeaderMerger< fields_forward_LUT_ordering, fields_reverse_LUT_ordering, samples_forward_LUT_ordering, samples_reverse_LUT_ordering >