picard.vcf.processor

Interface VariantAccumulatorExecutor<ACCUMULATOR extends VariantProcessor.Accumulator<RESULT>,RESULT>

All Known Implementing Classes:

VariantAccumulatorExecutor.MultiThreadedChunkBased

public interface VariantAccumulatorExecutor<ACCUMULATOR extends VariantProcessor.Accumulator<RESULT>,RESULT>

Describes the functionality for an executor that manages the delegation of work to VariantProcessor.Accumulators.

Nested Class Summary

Nested Classes

Modifier and Type	Interface and Description
static class	VariantAccumulatorExecutor.MultiThreadedChunkBased<A extends VariantProcessor.Accumulator<R>,R> A VariantAccumulatorExecutor that breaks down work into chunks described by the provided VariantIteratorProducer and spreads them over the indicated number of threads.

Method Summary

Modifier and Type	Method and Description
java.util.Collection<ACCUMULATOR>	accumulators() Returns the VariantProcessor.Accumulators associated with this executor.
void	awaitCompletion() Blocks until the work is complete.
void	start() Starts the work of the executor, returning immediately.

Method Detail

start

void start()

Starts the work of the executor, returning immediately.

awaitCompletion

void awaitCompletion()
              throws java.lang.InterruptedException

Blocks until the work is complete.

Throws:

java.lang.InterruptedException

accumulators

java.util.Collection<ACCUMULATOR> accumulators()

Returns the VariantProcessor.Accumulators associated with this executor.