Uses of Class
picard.vcf.processor.VcfFileSegmentGenerator

Packages that use VcfFileSegmentGenerator

Package	Description
picard.vcf.processor

Uses of VcfFileSegmentGenerator in picard.vcf.processor

Methods in picard.vcf.processor that return VcfFileSegmentGenerator

Modifier and Type	Method and Description
static VcfFileSegmentGenerator	VcfFileSegmentGenerator.byWholeContigSubdividingWithWidth(long segmentWidth)
static <T> VcfFileSegmentGenerator	VcfFileSegmentGenerator.excludingNonOverlaps(VcfFileSegmentGenerator strategy, htsjdk.samtools.util.OverlapDetector<T> overlaps) Returns a decorated VcfFileSegmentGenerator that filters out VcfFileSegments that have no overlap with the provided OverlapDetector.

Methods in picard.vcf.processor with parameters of type VcfFileSegmentGenerator

Modifier and Type	Method and Description
static <T> VcfFileSegmentGenerator	VcfFileSegmentGenerator.excludingNonOverlaps(VcfFileSegmentGenerator strategy, htsjdk.samtools.util.OverlapDetector<T> overlaps) Returns a decorated VcfFileSegmentGenerator that filters out VcfFileSegments that have no overlap with the provided OverlapDetector.