Package | Description |
---|---|
picard.sam.markduplicates | |
picard.sam.markduplicates.util |
Modifier and Type | Class and Description |
---|---|
class |
EstimateLibraryComplexity
Attempts to estimate library complexity from sequence alone.
|
class |
MarkDuplicates
A better duplication marking algorithm that handles all cases including clipped
and gapped alignments.
|
class |
MarkDuplicatesWithMateCigar
An even better duplication marking algorithm that handles all cases including clipped
and gapped alignments.
|
Modifier and Type | Class and Description |
---|---|
class |
AbstractMarkDuplicatesCommandLineProgram
Abstract class that holds parameters and methods common to classes that perform duplicate
detection and/or marking within SAM/BAM files.
|