Uses of Class
picard.sam.DuplicationMetrics

Packages that use DuplicationMetrics

Package	Description
picard.sam.markduplicates.util

Uses of DuplicationMetrics in picard.sam.markduplicates.util

Methods in picard.sam.markduplicates.util that return DuplicationMetrics

Modifier and Type	Method and Description
DuplicationMetrics	LibraryIdGenerator.getMetricsByLibrary(java.lang.String library)

Methods in picard.sam.markduplicates.util that return types with arguments of type DuplicationMetrics

Modifier and Type	Method and Description
java.util.Map<java.lang.String,DuplicationMetrics>	LibraryIdGenerator.getMetricsByLibraryMap()

Methods in picard.sam.markduplicates.util with parameters of type DuplicationMetrics

Modifier and Type	Method and Description
void	MarkQueue.add(ReadEndsForMateCigar other, htsjdk.samtools.util.SamRecordTrackingBuffer outputBuffer, DuplicationMetrics metrics) Add a record to the mark queue.
void	LibraryIdGenerator.addMetricsByLibrary(java.lang.String library, DuplicationMetrics metrics)