Uses of Class
picard.illumina.quality.CollectHiSeqXPfFailMetrics.ReadClassifier.PfFailReason

Packages that use CollectHiSeqXPfFailMetrics.ReadClassifier.PfFailReason

Package	Description
picard.illumina.quality

Uses of CollectHiSeqXPfFailMetrics.ReadClassifier.PfFailReason in picard.illumina.quality

Fields in picard.illumina.quality declared as CollectHiSeqXPfFailMetrics.ReadClassifier.PfFailReason

Modifier and Type	Field and Description
CollectHiSeqXPfFailMetrics.ReadClassifier.PfFailReason	CollectHiSeqXPfFailMetrics.PFFailDetailedMetric.CLASSIFICATION The classification of this read: {EMPTY, POLYCLONAL, MISALIGNED, UNKNOWN} (See PFFailSummaryMetric for explanation regarding the possible classification.)

Methods in picard.illumina.quality that return CollectHiSeqXPfFailMetrics.ReadClassifier.PfFailReason

Modifier and Type	Method and Description
static CollectHiSeqXPfFailMetrics.ReadClassifier.PfFailReason	CollectHiSeqXPfFailMetrics.ReadClassifier.PfFailReason.valueOf(java.lang.String name) Returns the enum constant of this type with the specified name.
static CollectHiSeqXPfFailMetrics.ReadClassifier.PfFailReason[]	CollectHiSeqXPfFailMetrics.ReadClassifier.PfFailReason.values() Returns an array containing the constants of this enum type, in the order they are declared.

Constructors in picard.illumina.quality with parameters of type CollectHiSeqXPfFailMetrics.ReadClassifier.PfFailReason

Constructor and Description
PFFailDetailedMetric(java.lang.Integer TILE, int x, int y, int NUM_N, int NUM_Q_GT_TWO, CollectHiSeqXPfFailMetrics.ReadClassifier.PfFailReason CLASSIFICATION)