picard.illumina.parser

Class BclData

java.lang.Object

picard.illumina.parser.BclData

public class BclData
extends java.lang.Object

A class that implements the IlluminaData interfaces provided by this parser One BclData object is returned to IlluminaDataProvider per cluster and each first level array in bases and qualities represents a single read in that cluster

Field Summary

Fields

Modifier and Type	Field and Description
byte[][]	bases
byte[][]	qualities

Constructor Summary

Constructors

Constructor and Description
BclData(int[] outputLengths)

Method Summary

Modifier and Type	Method and Description
byte[][]	getBases()
byte[][]	getQualities()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

bases

public final byte[][] bases

qualities

public final byte[][] qualities

Constructor Detail

BclData

public BclData(int[] outputLengths)

Method Detail

getBases

public byte[][] getBases()

getQualities

public byte[][] getQualities()