picard.illumina

Interfaces

• IlluminaBasecallsConverter.ClusterDataConverter
• IlluminaBasecallsConverter.ConvertedClusterDataWriter

Classes

• CheckIlluminaDirectory
• ClusterDataToSamConverter
• CollectIlluminaBasecallingMetrics
• CollectIlluminaLaneMetrics
• CollectIlluminaLaneMetrics.IlluminaLaneMetricsCollector
• ExtractIlluminaBarcodes
• ExtractIlluminaBarcodes.BarcodeMetric
• IlluminaBasecallingMetrics
• IlluminaBasecallsConverter
• IlluminaBasecallsToFastq
• IlluminaBasecallsToSam
• IlluminaLaneMetrics
• IlluminaPhasingMetrics
• LanePhasingMetricsCollector
• MarkIlluminaAdapters

Enums

• IlluminaBasecallsToFastq.ReadNameFormat