Uses of Interface
picard.illumina.IlluminaBasecallsConverter.ConvertedClusterDataWriter

Packages that use IlluminaBasecallsConverter.ConvertedClusterDataWriter

Package	Description
picard.illumina

Uses of IlluminaBasecallsConverter.ConvertedClusterDataWriter in picard.illumina

Constructor parameters in picard.illumina with type arguments of type IlluminaBasecallsConverter.ConvertedClusterDataWriter

Constructor and Description
IlluminaBasecallsConverter(java.io.File basecallsDir, java.io.File barcodesDir, int lane, ReadStructure readStructure, java.util.Map<java.lang.String,? extends IlluminaBasecallsConverter.ConvertedClusterDataWriter<CLUSTER_OUTPUT_RECORD>> barcodeRecordWriterMap, boolean demultiplex, int maxReadsInRamPerTile, java.util.List<java.io.File> tmpDirs, int numProcessors, boolean forceGc, java.lang.Integer firstTile, java.lang.Integer tileLimit, java.util.Comparator<CLUSTER_OUTPUT_RECORD> outputRecordComparator, htsjdk.samtools.util.SortingCollection.Codec<CLUSTER_OUTPUT_RECORD> codecPrototype, java.lang.Class<CLUSTER_OUTPUT_RECORD> outputRecordClass, BclQualityEvaluationStrategy bclQualityEvaluationStrategy, boolean applyEamssFiltering, boolean includeNonPfReads, boolean ignoreUnexpectedBarcodes)
IlluminaBasecallsConverter(java.io.File basecallsDir, int lane, ReadStructure readStructure, java.util.Map<java.lang.String,? extends IlluminaBasecallsConverter.ConvertedClusterDataWriter<CLUSTER_OUTPUT_RECORD>> barcodeRecordWriterMap, boolean demultiplex, int maxReadsInRamPerTile, java.util.List<java.io.File> tmpDirs, int numProcessors, boolean forceGc, java.lang.Integer firstTile, java.lang.Integer tileLimit, java.util.Comparator<CLUSTER_OUTPUT_RECORD> outputRecordComparator, htsjdk.samtools.util.SortingCollection.Codec<CLUSTER_OUTPUT_RECORD> codecPrototype, java.lang.Class<CLUSTER_OUTPUT_RECORD> outputRecordClass, BclQualityEvaluationStrategy bclQualityEvaluationStrategy, boolean applyEamssFiltering, boolean includeNonPfReads, boolean ignoreUnexpectedBarcodes)