Uses of Class
picard.analysis.directed.HsMetricCollector

Packages that use HsMetricCollector

Package	Description
picard.analysis.directed

Uses of HsMetricCollector in picard.analysis.directed

Methods in picard.analysis.directed that return HsMetricCollector

Modifier and Type

Method and Description

protected HsMetricCollector

CollectHsMetrics.makeCollector(java.util.Set<MetricAccumulationLevel> accumulationLevels, java.util.List<htsjdk.samtools.SAMReadGroupRecord> samRgRecords, htsjdk.samtools.reference.ReferenceSequenceFile refFile, java.io.File perTargetCoverage, java.io.File perBaseCoverage, htsjdk.samtools.util.IntervalList targetIntervals, htsjdk.samtools.util.IntervalList probeIntervals, java.lang.String probeSetName, int nearProbeDistance)