Uses of Class
picard.analysis.AlignmentSummaryMetrics.Category

Packages that use AlignmentSummaryMetrics.Category

Package	Description
picard.analysis

Uses of AlignmentSummaryMetrics.Category in picard.analysis

Fields in picard.analysis declared as AlignmentSummaryMetrics.Category

Modifier and Type	Field and Description
AlignmentSummaryMetrics.Category	AlignmentSummaryMetrics.CATEGORY One of either UNPAIRED (for a fragment run), FIRST_OF_PAIR when metrics are for only the first read in a paired run, SECOND_OF_PAIR when the metrics are for only the second read in a paired run or PAIR when the metrics are aggregated for both first and second reads in a pair.

Methods in picard.analysis that return AlignmentSummaryMetrics.Category

Modifier and Type	Method and Description
static AlignmentSummaryMetrics.Category	AlignmentSummaryMetrics.Category.valueOf(java.lang.String name) Returns the enum constant of this type with the specified name.
static AlignmentSummaryMetrics.Category[]	AlignmentSummaryMetrics.Category.values() Returns an array containing the constants of this enum type, in the order they are declared.