public class GcBiasUtils
extends java.lang.Object
Constructor and Description |
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GcBiasUtils() |
Modifier and Type | Method and Description |
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static byte[] |
calculateAllGcs(byte[] refBases,
int lastWindowStart,
int windowSize) |
static int |
calculateGc(byte[] bases,
int startIndex,
int endIndex,
picard.analysis.GcBiasUtils.CalculateGcState state) |
static int[] |
calculateRefWindowsByGc(int windows,
java.io.File referenceSequence,
int windowSize) |
public static int calculateGc(byte[] bases, int startIndex, int endIndex, picard.analysis.GcBiasUtils.CalculateGcState state)
public static int[] calculateRefWindowsByGc(int windows, java.io.File referenceSequence, int windowSize)
public static byte[] calculateAllGcs(byte[] refBases, int lastWindowStart, int windowSize)