missing.h File Reference

#include "sam/sam_tag.h"
#include "utils/utils.h"
#include "htslib/vcf.h"
#include <vector>
#include <string>
#include <cmath>

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Namespaces
	gamgee
	gamgee::missing_values

Functions
bool	gamgee::missing (const bool value)
	Returns true if bool is false (missing). More...
bool	gamgee::missing (const float value)
	Returns true if float is missing. More...
bool	gamgee::missing (const int8_t value)
	Returns true if int8_t is missing. More...
bool	gamgee::missing (const int16_t value)
	Returns true if int16_t is missing. More...
bool	gamgee::missing (const int32_t value)
	Returns true if int32_t is missing. More...
bool	gamgee::missing (const std::string &value)
	Returns true if string is missing. More...
bool	gamgee::missing (const char *value)
	Returns true if char* is missing. More...
template<class MISSING_TYPE >
bool	gamgee::missing (const MISSING_TYPE &value)
template<class VALUE >
bool	gamgee::missing (const std::vector< VALUE > &v)

Variables
constexpr auto	gamgee::missing_values::int8 = bcf_int8_missing
	missing value for an int8 More...
constexpr auto	gamgee::missing_values::int16 = bcf_int16_missing
	missing value for an int16 More...
constexpr auto	gamgee::missing_values::int32 = bcf_int32_missing
	missing value for an int32 More...
constexpr auto	gamgee::missing_values::string_empty = ""
	empty string is a missing string More...
constexpr auto	gamgee::missing_values::string_dot = "."
	"dot" is a missing string in the VCF spec. More...