fastq.h File Reference

#include <string>

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Classes
class	gamgee::Fastq
	Utility class to hold one FastA or FastQ record. More...

Namespaces
	gamgee

Functions
std::ostream &	operator<< (std::ostream &os, const gamgee::Fastq &fq)
	outputs the fastq record in fastq format. More...

Function Documentation

std::ostream& operator<<	(	std::ostream &	os,
		const gamgee::Fastq &	fq
	)

outputs the fastq record in fastq format.

The output checks whether the record has quality scores. If it does, it outputs a fastq record, otherwise it outputs a fasta record.