fastq.cpp File Reference

#include "fastq.h"
#include "utils/utils.h"
#include <iostream>

Namespaces
	gamgee

Functions
std::ostream &	operator<< (std::ostream &os, const gamgee::Fastq &fq)
	outputs the fastq record in fastq format. More...

Function Documentation

std::ostream& operator<<	(	std::ostream &	os,
		const gamgee::Fastq &	fq
	)

outputs the fastq record in fastq format.

The output checks whether the record has quality scores. If it does, it outputs a fastq record, otherwise it outputs a fasta record.