cram.h File Reference

#include "cram/cram_samtools.h"
#include "cram/sam_header.h"
#include "cram_structs.h"
#include "cram_io.h"
#include "cram_encode.h"
#include "cram_decode.h"
#include "cram_stats.h"
#include "cram_codecs.h"
#include "cram_index.h"

Go to the source code of this file.

Macros
#define	_CRAM_H_

Detailed Description

CRAM interface.

Consider using the higher level scram_*() API for programs that wish to be file format agnostic.

This API should be used for CRAM specific code. The specifics of the public API are implemented in cram_io.h, cram_encode.h and cram_decode.h although these should not be included directly (use this file instead).

Macro Definition Documentation

#define _CRAM_H_