ONTUtils
GetRunInfo
- description
- Get ONT run info from a final summary file.
Inputs
Required
final_summary(String, required): Sequencing summary file.
Optional
runtime_attr_override(RuntimeAttr?): Override default runtime attributes.
Outputs
run_info(Map[String,String])
ListFiles
- description
- List files in a GCS directory.
Inputs
Required
sequencing_summary(String, required): Sequencing summary file.suffix(String, required): Suffix of files to list.
Optional
runtime_attr_override(RuntimeAttr?): Override default runtime attributes.
Outputs
manifest(File)count(Int)
PartitionManifest
- description
- Partition a manifest into chunks.
Inputs
Required
N(Int, required): Number of chunks to partition into.manifest(File, required): Manifest to partition.
Optional
runtime_attr_override(RuntimeAttr?): Override default runtime attributes.
Outputs
manifest_chunks(Array[File])