Interface | Description |
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PerUnitMetricCollector<BEAN extends htsjdk.samtools.metrics.MetricBase,HKEY extends java.lang.Comparable,ARGTYPE> |
PerRecordCollector - An interface for classes that collect data in order to generate one or more metrics.
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Class | Description |
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GcBiasMetrics | |
MultiLevelCollector<METRIC_TYPE extends htsjdk.samtools.metrics.MetricBase,Histogram_KEY extends java.lang.Comparable,ARGTYPE> |
MultiLevelCollector handles accumulating Metrics at different MetricAccumulationLevels(ALL_READS, SAMPLE, LIBRARY, READ_GROUP).
|
MultilevelMetrics | |
SAMRecordAndReference | |
SAMRecordAndReferenceMultiLevelCollector<BEAN extends htsjdk.samtools.metrics.MetricBase,HKEY extends java.lang.Comparable> | |
SAMRecordMultiLevelCollector<BEAN extends htsjdk.samtools.metrics.MetricBase,HKEY extends java.lang.Comparable> |
Defines a MultilevelPerRecordCollector using the argument type of SAMRecord so that this doesn't have to be redefined for each subclass of MultilevelPerRecordCollector
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