public class LocsFileReader extends AbstractIlluminaPositionFileReader
AbstractIlluminaPositionFileReader.PositionInfo
MAX_POS, MIN_POS
Constructor and Description |
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LocsFileReader(java.io.File file) |
LocsFileReader(java.io.File file,
int lane,
int tile) |
Modifier and Type | Method and Description |
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void |
close() |
boolean |
hasNext()
Return true if the file has more elements to return, false otherwise
|
protected java.lang.String |
makeExceptionMsg()
Create a string that will be included in any NoSuchElementException thrown by the next() method
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void |
skipRecords(int numToSkip) |
protected AbstractIlluminaPositionFileReader.PositionInfo |
unsafeNextInfo()
Returns the next position info.
|
getFile, getLane, getTile, next, remove
public LocsFileReader(java.io.File file)
public LocsFileReader(java.io.File file, int lane, int tile)
protected AbstractIlluminaPositionFileReader.PositionInfo unsafeNextInfo()
AbstractIlluminaPositionFileReader
unsafeNextInfo
in class AbstractIlluminaPositionFileReader
protected java.lang.String makeExceptionMsg()
AbstractIlluminaPositionFileReader
makeExceptionMsg
in class AbstractIlluminaPositionFileReader
public boolean hasNext()
AbstractIlluminaPositionFileReader
hasNext
in interface java.util.Iterator<AbstractIlluminaPositionFileReader.PositionInfo>
hasNext
in class AbstractIlluminaPositionFileReader
public void close()
public void skipRecords(int numToSkip)