picard.illumina.parser.fakers

Class FileFaker

java.lang.Object

picard.illumina.parser.fakers.FileFaker

Direct Known Subclasses:

BarcodeFileFaker, BciFileFaker, BclFileFaker, ClocsFileFaker, FilterFileFaker, LocsFileFaker, MultiTileBclFileFaker, MultiTileLocsFileFaker, PosFileFaker

public abstract class FileFaker
extends java.lang.Object

Constructor Summary

Constructors

Constructor and Description
FileFaker()

Method Summary

Modifier and Type	Method and Description
protected abstract boolean	addLeadingZeros()
protected abstract int	bufferSize()
protected abstract void	fakeFile(java.nio.ByteBuffer buffer)
void	fakeFile(java.io.File cycleFile, java.lang.Integer size)
void	fakeFile(java.io.File base, int tile, int lane, java.lang.String extension)
void	fakeFile(java.io.File base, java.util.List<java.lang.Integer> expectedTiles, int lane, java.lang.String extension)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

FileFaker

public FileFaker()

Method Detail

fakeFile

protected abstract void fakeFile(java.nio.ByteBuffer buffer)

addLeadingZeros

protected abstract boolean addLeadingZeros()

bufferSize

protected abstract int bufferSize()

fakeFile

public void fakeFile(java.io.File base,
                     int tile,
                     int lane,
                     java.lang.String extension)
              throws java.io.IOException

Throws:

java.io.IOException

fakeFile

public void fakeFile(java.io.File base,
                     java.util.List<java.lang.Integer> expectedTiles,
                     int lane,
                     java.lang.String extension)
              throws java.io.IOException

Throws:

java.io.IOException

fakeFile

public void fakeFile(java.io.File cycleFile,
                     java.lang.Integer size)
              throws java.io.IOException

Throws:

java.io.IOException