variant_builder_shared_region.h File Reference

#include "../utils/hts_memory.h"
#include "htslib/kstring.h"
#include "htslib/vcf.h"
#include "variant.h"
#include <string>
#include <vector>
#include <utility>

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Classes
struct	gamgee::SharedBufferSpan
	Represents a section (range of bytes) in the shared memory pool VariantBuilderSharedRegion::m_shared_buffer that is currently in use to store encoded field data. More...
class	gamgee::VariantBuilderSharedRegion
	Helper class for VariantBuilder to manage the fields belonging to the shared region of Variant records. More...

Namespaces
	gamgee

Enumerations
enum	gamgee::SharedFieldIndex {   gamgee::SharedFieldIndex::ID_INDEX = 0, gamgee::SharedFieldIndex::REF_ALLELE_INDEX = 1, gamgee::SharedFieldIndex::ALT_ALLELES_INDEX = 2, gamgee::SharedFieldIndex::FILTERS_INDEX = 3,   gamgee::SharedFieldIndex::INFO_START_INDEX = 4 }
	Enum to represent the ordering of the various shared fields as they are physically laid out in the encoded data. More...